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Solution structure of fucosylated LacDiNAc (LDNF)
Authors
Schubert, M., Allain, F., Zierke, M.
Assembly
LDNF (trisaccharide)
Entity
1. LDNF (trisaccharide) (polymer, Thiol state: not present), 4 monomers, 566.5522 Da
Formula weight
566.5522 Da
Source organism
Schistosoma mansoni
Exptl. method
SOLUTION NMR
Data set
assigned_chemical_shifts
Chemcal Shifts
1H: 46, 13C: 30 assignments Detail
IDEntity IDSeq IDComp IDAtom IDAtom typeValVal errAmbig. code
111SPH21H2.1580.0051
211SPH22H2.1580.0051
311SPH31H1.5330.0051
411SPH32H1.5330.0051
511SPH41H1.2750.0094
611SPH42H1.2750.0094
711SPH51H1.2850.0054
811SPH52H1.2850.0054
911SPH61H1.2860.0054
1011SPH62H1.2860.0054
1111SPH71H1.2860.0051
1211SPH72H1.2860.0051
1311SPH81H1.5230.0051
1411SPH82H1.5230.0051
1511SPH91H3.8820.0052
1611SPH92H3.5560.0052
1711SPC2C40.2870.0501
1811SPC3C28.6110.0501
1911SPC4C31.4240.0504
2011SPC5C31.3500.0504
2111SPC6C30.9210.0504
2211SPC7C27.7580.0501
2311SPC8C31.2210.0501
2411SPC9C73.3670.0501
2512MAGH1H4.4650.0051
2612MAGH2H3.8900.0051
2712MAGH3H3.7970.0051
2812MAGH4H3.8770.0051
2912MAGH5H3.4920.0051
3012MAGH61H3.9140.0052
3112MAGH62H3.7280.0052
3212MAGH81H2.0120.0051
3312MAGH82H2.0120.0051
3412MAGH83H2.0120.0051
3512MAGHN2H8.5550.0051
3612MAGC1C103.6220.0501
3712MAGC2C58.3840.0501
3812MAGC3C77.3400.0501
3912MAGC4C75.9300.0501
4012MAGC5C77.9230.0501
4112MAGC6C62.5580.0501
4212MAGC7C176.8790.0501
4312MAGC8C24.8850.0501
4413A2GH1H4.4470.0051
4513A2GH2H3.9850.0051
4613A2GH3H3.6980.0051
4713A2GH4H3.8890.0051
4813A2GH5H3.5640.0051
4913A2GH61H3.7560.0052
5013A2GH62H3.7110.0052
5113A2GH81H2.0340.0051
5213A2GH82H2.0340.0051
5313A2GH83H2.0340.0051
5413A2GHN2H8.4600.0051
5513A2GC1C103.4320.0501
5613A2GC2C54.9300.0501
5713A2GC3C73.3890.0501
5813A2GC4C70.0160.0501
5913A2GC5C77.5610.0501
6013A2GC6C64.2450.0501
6113A2GC7C177.6080.0501
6213A2GC8C24.8180.0501
6314FUCH1H5.1120.0051
6414FUCH2H3.6730.0051
6514FUCH3H3.9390.0051
6614FUCH4H3.8230.0051
6714FUCH5H4.8870.0051
6814FUCH61H1.2590.0051
6914FUCH62H1.2590.0051
7014FUCH63H1.2590.0051
7114FUCC1C101.2880.0501
7214FUCC2C70.2810.0501
7314FUCC3C71.7660.0501
7414FUCC4C74.6330.0501
7514FUCC5C69.6470.0501
7614FUCC6C18.0480.0501

Release date
2014-01-29
Citation
A Secondary Structural Element in a Wide Range of Fucosylated Glycoepitopes
Aeschbacher, T., Zierke, M., Smiesko, M., Collot, M., Mallet, J.M., Ernst, B., Allain, F.H., Schubert, M.
Chemistry (2017), 23, 11598-11610, PubMed 28654715 , DOI 10.1002/chem.201701866 ,
Experiments performed 5 experiments Detail
Keywords LDNF, carbohydrate, glycan, glycoepitope, oligosaccharide