BMRBj - BMREntryMaster

Found 1 Document (0.882 seconds)

BMRB: 15053

1QLX

HPRP-173-195 SOLUTION STRUCTURE

Authors

Saviano, G., Tancredi, T.

Assembly

prion protein fragment

Entity

1. prion protein fragment (polymer, Thiol state: all free), 23 monomers, 2571.859 Da Detail

NNFVHDCVNI TIKQHTVTTT TKG

Formula weight

2571.859 Da

Source organism

Homo sapiens

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 84.0 %, Completeness (bb): 100.0 % Detail

Polymer type: polypeptide(L)

	Total	¹H
All	84.0 % (110 of 131)	84.0 % (110 of 131)
Backbone	100.0 % (47 of 47)	100.0 % (47 of 47)
Sidechain	75.0 % (63 of 84)	75.0 % (63 of 84)
Aromatic	44.4 % (4 of 9)	44.4 % (4 of 9)
Methyl	75.0 % (12 of 16)	75.0 % (12 of 16)

1. HPRP173195

NNFVHDCVNI TIKQHTVTTT TKG

Show sample condition

Sample

Pressure 1.0 atm, Temperature 300.0 K, pH 5.0, Details TRIFLUOROETHANOL-D2

#	Name	Isotope labeling	Type	Concentration
1	HPRP173195	natural abundance		1.0 ~ 2.0 mM
2	TRIFLUOROETHANOL-D2	[U-2H]		100 %

Release date

2007-01-31

Citation

Structural characterization of a neurotoxic threonine-rich peptide corresponding to the human prion protein alpha 2-helical 180-195 segment, and comparison with full-length alpha 2-helix-derived peptides
Ronga, L., Palladino, P., Saviano, G., Tancredi, T., Benedetti, E., Ragone, R., Rossi, F.
J. Pept. Sci. (2008), 14, 1096-1102, PubMed 18563793 , DOI 10.1002/psc.1046 , Abstract

Entries sharing articles BMRB: 2 entries Detail

  BMRB: 15052 released on 2007-01-31
    Title HPRP-173-195-D178N SOLUTION STRUCTURE
  BMRB: 15054 released on 2007-01-31
    Title HPRP180-195 STRUCTURE

Input source #1: Assigned chemical shifts - Assigned chemical shifts	bmr15053_3.str
Diamagnetism of the molecular assembly	True (excluding Oxygen atoms)
Whether the assembly has a disulfide bond	None
Whether the assembly has a other bond	None
Whether the assembly contains a cyclic polymer	None
Overall data processing status	Warning

#	Content subtype	Saveframe	Status	# of rows	Experiment type	Sequence coverage (%)
1	Assigned chemical shifts	assigned_chem_shift_list_1	Warning	133		100.0 (chain: 1, length: 23)
1	Chemical shift references	chemical_shift_reference_1	OK	1		No information

Comp_index_ID	Comp_ID	Atom_ID	CS value (ppm)
22	LYS	HZ1	6.93
22	LYS	HZ2	6.93
22	LYS	HZ3	6.93

Search

Query history

Resources

Search for primary databases

Search for subsidiary databases

Display

Hits per page

Statistics

Query Changes will take effect after "OK" button is selected.

Maximum hits

Default conjunction operator

Omni-box

Search filter

Sequence search (BLAST)

E-value

Query sequence coverage

Miscellaneous

The number of previewed publications

Completeness of assigned chemical shift

Sequence chart about top aligned regions

Sequence chart about interacting regions

Hit context with highlight

Link destinations for BMRB, PDB and EMDB

Found 1 Document (0.882 seconds)

BMRB: 15053

Sample

Entries sharing articles BMRB: 2 entries Detail

Related entities 1. prion protein fragment, : 1 : 83 : 44 : 5 : 15 entities Detail

Interaction partners 1. prion protein fragment, : 68 interactors Detail

Experiments performed 4 experiments Detail

Instrument

Sample

Instrument

Sample

Instrument

Sample

Instrument

Sample

Chemical shift validation 3 contents Detail