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BMRB: 15276

7JXD

1H, 13C and 15N resonance assignment of 6aJL2(R25G), a highly fibrillogenic lamdaVI light chain variable domain.

Authors

Gutierrez-Gonzalez, L.H., Muresanu, L., del Pozo-Yauner, L., Sanchez, R., Guereca, L., Becerril, B., Luecke, C.

Assembly

6aJL2

Entity

1. 6aJL2 (polymer, Thiol state: all disulfide bound), 111 monomers, 11853.70 Da Detail

NFMLTQPHSV SESPGKTVTI SCTGSSGSIA SNYVQWYQQR PGSSPTTVIY EDNQRPSGVP DRFSGSIDSS SNSASLTISG LKTEDEADYY CQSYDSSNHV VFGGGTKLTV L

Formula weight

11853.7 Da

Entity Connection

disulfide 1 Detail

ID	Type	Value order	Atom ID 1	Atom ID 2
1	disulfide	sing	1:CYS22:SG	1:CYS91:SG

Source organism

Homo sapiens

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 99.1 %, Completeness (bb): 99.7 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	99.1 % (1186 of 1197)	99.0 % (608 of 614)	99.6 % (464 of 466)	97.4 % (114 of 117)
Backbone	99.7 % (652 of 654)	100.0 % (226 of 226)	99.7 % (322 of 323)	99.0 % (104 of 105)
Sidechain	98.6 % (635 of 644)	98.5 % (382 of 388)	99.6 % (243 of 244)	83.3 % (10 of 12)
Aromatic	98.0 % (96 of 98)	98.0 % (48 of 49)	97.9 % (47 of 48)	100.0 % (1 of 1)
Methyl	100.0 % (98 of 98)	100.0 % (49 of 49)	100.0 % (49 of 49)

1. 6aJL2

NFMLTQPHSV SESPGKTVTI SCTGSSGSIA SNYVQWYQQR PGSSPTTVIY EDNQRPSGVP DRFSGSIDSS SNSASLTISG LKTEDEADYY CQSYDSSNHV VFGGGTKLTV L

Show sample condition

Sample #1

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 300 K, pH 5.2

#	Name	Isotope labeling	Concentration
1	6aJL2	natural abundance	1.2 mM
2	sodium phosphate	natural abundance	25 mM
3	sodium azide	natural abundance	0.05 %
4	H2O		95 %
5	D2O		5 %

Sample #2

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 300 K, pH 5.2

#	Name	Isotope labeling	Concentration
6	6aJL2	[U-95% 15N]	1.2 mM
7	sodium phosphate	natural abundance	25 mM
8	sodium azide	natural abundance	0.05 %
9	H2O		95 %
10	D2O		5 %

Sample #3

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 300 K, pH 5.2

#	Name	Isotope labeling	Concentration
11	6aJL2	[U-95% 13C; U-95% 15N]	1.2 mM
12	sodium phosphate	natural abundance	25 mM
13	sodium azide	natural abundance	0.05 %
14	H2O		95 %
15	D2O		5 %

Sample #4

Solvent system 100% D2O, Pressure 1 atm, Temperature 300 K, pH 5.2

#	Name	Isotope labeling	Concentration
16	6aJL2	natural abundance	1.3 mM
17	sodium phosphate	natural abundance	25 mM
18	sodium azide	natural abundance	0.05 %
19	D2O		100 %

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	null	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	null	indirect	0.1013291

Referencing offset: -0.08 ppm, Outliers: 2 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	null	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	null	indirect	0.1013291

Referencing offset: -0.08 ppm, Outliers: 2 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	null	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	null	indirect	0.1013291

Referencing offset: -0.1 ppm, Outliers: 2 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	null	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	null	indirect	0.1013291

Referencing offset: 0.71 ppm, Outliers: 4 Detail

Release date

2007-09-16

Citation

(1)H, (13)C and (15)N resonance assignment of 6aJL2(R25G), a highly fibrillogenic lambdaVI light chain variable domain
Gutierrez-Gonzalez, L.H., Muresanu, L., del Pozo-Yauner, L., Sanchez, R., Guereca, L., Becerril, B., Lucke, C.
Biomol. NMR Assign. (2007), 1, 159-161, PubMed 19636854 , DOI 10.1007/s12104-007-9045-9 , Abstract

Related entities 1. 6aJL2, : 1 : 3 : 2 : 5 : 410 entities Detail

Experiments performed 18 experiments Detail

1 2D 1H-1H TOCSY