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Backbone chemical shift assignements for monomeric apoSOD1
Authors
Teilum, K., Akke, M.
Assembly
SOD1
Entity
1. SOD1 (polymer, Thiol state: all disulfide bound), 153 monomers, 15794.23 × 2 Da Detail

ATKAVAVLKG DGPVQGIINF EQKESNGPVK VWGSIKGLTE GLHGFHVHEE EDNTAGCTSA GPHFNPLSRK HGGPKDEERH VGDLGNVTAD KDGVADVSIE DSVISLSGDH AIIGRTLVVH EKADDLGKGG NEESTKTGNA GSRLACGVIG IAQ


Total weight
31588.46 Da
Max. entity weight
15794.23 Da
Entity Connection
disulfide 2 Detail

IDTypeValue orderAtom ID 1Atom ID 2
1disulfidesing1:CYS57:SG1:CYS146:SG
2disulfidesing1:CYS57:SG1:CYS146:SG

Source organism
Homo sapiens
Exptl. method
solution NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 98.7 %, Completeness: 49.7 %, Completeness (bb): 80.5 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All49.7 % (804 of 1618)25.7 % (214 of 832)71.3 % (447 of 627)89.9 % (143 of 159)
Backbone80.5 % (731 of 908)50.2 % (163 of 325)97.9 % (426 of 435)95.9 % (142 of 148)
Sidechain23.7 % (199 of 839)10.1 % (51 of 507)45.8 % (147 of 321) 9.1 % (1 of 11)
Aromatic 5.4 % (4 of 74) 5.4 % (2 of 37) 2.8 % (1 of 36)100.0 % (1 of 1)
Methyl23.8 % (40 of 168)19.0 % (16 of 84)28.6 % (24 of 84)

1. SOD1

ATKAVAVLKG DGPVQGIINF EQKESNGPVK VWGSIKGLTE GLHGFHVHEE EDNTAGCTSA GPHFNPLSRK HGGPKDEERH VGDLGNVTAD KDGVADVSIE DSVISLSGDH AIIGRTLVVH EKADDLGKGG NEESTKTGNA GSRLACGVIG IAQ

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.3


#NameIsotope labelingTypeConcentration
1SOD1[U-100% 13C; U-100% 15N]1 mM
2MESnatural abundance10 mM
3EDTAnatural abundance1 mM
4D2Onatural abundance10 %

Release date
2009-09-30
Citation
Transient structural distortion of metal-free Cu/Zn superoxide dismutase triggers aberrant oligomerization
Teilum, K., Smith, M.H., Schulz, E., Christensen, L.C., Solomentsev, G., Oliveberg, M., Akke, M.
Proc. Natl. Acad. Sci. U. S. A. (2009), 106, 18273-18278, PubMed 19828437 , DOI 10.1073/pnas.0907387106 ,
Entries sharing articles BMRB: 3 entries Detail
  BMRB: 15712 released on 2009-09-30
    Title Backbone chemical shift assignements for monomeric apoSOD1 - variant A4V
  BMRB: 15713 released on 2009-09-30
    Title Backbone chemical shift assignements for monomeric apoSOD1 - variant G85R
  BMRB: 15714 released on 2009-09-30
    Title Backbone chemical shift assignements for monomeric apoSOD1 - variant D90A
Related entities 1. SOD1, : 1 : 4 : 81 : 163 entities Detail
Interaction partners 1. SOD1, : 26 interactors Detail
Experiments performed 6 experiments Detail
Chemical shift validation 3 contents Detail