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1H, 15N chemical shifts of the UHM domain of Puf60 in complex with SF1(1-25)
Authors
Corsini, L., Sattler, M.
Assembly
minimal complex of Puf60 and SF1
Entity
1. UHM domain of Puf60 (polymer, Thiol state: all free), 110 monomers, 12636.97 Da Detail

MKHHHHHHPM ESTVMVLRNM VDPKDIDDDL EGEVTEECGK FGAVNRVIIY QEKQGEEEDA EIIVKIFVEF SIASETHKAI QALNGRWFAG RKVVAEVYDQ ERFDNSDLSA


2. SF1(1-25) (polymer, Thiol state: not present), 25 monomers, 2876.212 Da Detail

MATGANATPL DFPSKKRKRS RWNQD


Total weight
15513.182 Da
Max. entity weight
12636.97 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Data set
assigned_chemical_shifts, spectral_peak_list
Chem. Shift Complete
Sequence coverage: 68.9 %, Completeness: 20.6 %, Completeness (bb): 47.3 % Detail

Polymer type: polypeptide(L)

Total1H15N
All20.6 % (199 of 967)12.9 % (106 of 823)64.6 % (93 of 144)
Backbone47.3 % (191 of 404)35.9 % (98 of 273)71.0 % (93 of 131)
Sidechain 1.4 % (8 of 563) 1.5 % (8 of 550) 0.0 % (0 of 13)
Aromatic 3.0 % (2 of 66) 3.1 % (2 of 64) 0.0 % (0 of 2)
Methyl 7.8 % (5 of 64) 7.8 % (5 of 64)

1. UHM domain of Puf60

MKHHHHHHPM ESTVMVLRNM VDPKDIDDDL EGEVTEECGK FGAVNRVIIY QEKQGEEEDA EIIVKIFVEF SIASETHKAI QALNGRWFAG RKVVAEVYDQ ERFDNSDLSA

2. SF1(1-25)

MATGANATPL DFPSKKRKRS RWNQD

Sample

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 295 (±0.1) K, pH 6.8 (±0.1)


#NameIsotope labelingTypeConcentration
1UHM domain of Puf60[U-100% 13C; U-100% 15N]0.177 (±0.01) mM
2SF1(1-25)natural abundance0.333 (±0.01) mM
3NaH2PO4natural abundance50 mM
4NaClnatural abundance150 mM
5b-mercaptoethanolnatural abundance5 mM
6H2Onatural abundance95 %
7D2O[U-100% 2H]5 %

Release date
2008-10-14
Citation
Backbone assignment of the UHM domain of Puf60 free and bound to five ligands
Corsini, L., Sattler, M.
Biomol. NMR Assign. (2008), 2, 211-214, PubMed 19636907 , DOI 10.1007/s12104-008-9123-7 ,
Entries sharing articles BMRB: 5 entries Detail
  BMRB: 15885 released on 2008-10-14
    Title Backbone assignment of the UHM domain of Puf60 in the free form
  BMRB: 15887 released on 2008-10-14
    Title 1H, 15N chemical shifts of the UHM domain of Puf60 in complex with U2AF65(85-112)
  BMRB: 15889 released on 2008-10-14
    Title 1H, 15N chemical shifts of the UHM domain of Puf60 in complex with SF3b155(194-229)
  BMRB: 15890 released on 2008-10-14
    Title 1H, 15N chemical shifts of the UHM domain of Puf60 in complex with SF3b155(317-357)
  BMRB: 15891 released on 2008-10-14
    Title 1H, 15N chemical shifts of the UHM domain of Puf60 in complex with Prp16(201-238)
Related entities 1. UHM domain of Puf60, : 1 : 74 entities Detail
Related entities 2. SF1(1-25), : 1 : 5 : 1 entities Detail
Interaction partners 2. SF1(1-25), : 155 interactors Detail
Experiments performed 1 experiments Detail
Chemical shift validation 4 contents Detail
Keywords alternative splicing, FBP interacting repressor, RRM, splicing, UHM, UHM ligand motif, ULM