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Shc-PTB:biphosphorylated integrin beta3 cytoplasmic tail complex (1:1)
Authors
Deshmukh, L., Gorbatyuk, V., Vinogradova, O.
Assembly
Shc-PTB complex with Integrin beta3
Entity
1. Shc-PTB (polymer, Thiol state: unknown), 211 monomers, 23132.16 Da Detail

GSSHHHHHHS SGLVPRGSHM GQLGGEEWTR HGSFVNKPTR GWLHPNDKVM GPGVSYLVRY MGCVEVLQSM RALDFNTRTQ VTREAISLVC EAVPGAKGAT RRRKPCSRPL SSILGRSNLK FAGMPITLTV STSSLNLMAA DCKQIIANHH MQSISFASGG DPDTAEYVAY VAKDPVNQRA CHILECPEGL AQDVISTIGQ AFELRFKQYL R


2. Integrin beta3 (polymer, Thiol state: not present), 27 monomers, 3280.344 Da Detail

RAKWDTANNP LXKEATSTFT NITXRGT


Total weight
26412.504 Da
Max. entity weight
23132.16 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
DGSA-distance geometry simulated annealing
Data set
assigned_chemical_shifts, heteronucl_NOEs, heteronucl_T1_relaxation, heteronucl_T2_relaxation
Chem. Shift Complete
Sequence coverage: 89.9 %, Completeness: 75.9 %, Completeness (bb): 80.2 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All75.9 % (2017 of 2659)78.8 % (1086 of 1379)71.8 % (742 of 1034)76.8 % (189 of 246)
Backbone80.2 % (1116 of 1392)87.1 % (418 of 480)76.3 % (525 of 688)77.2 % (173 of 224)
Sidechain71.7 % (1064 of 1483)74.3 % (668 of 899)67.6 % (380 of 562)72.7 % (16 of 22)
Aromatic46.9 % (91 of 194)52.6 % (51 of 97)40.4 % (38 of 94)66.7 % (2 of 3)
Methyl88.5 % (216 of 244)93.4 % (114 of 122)83.6 % (102 of 122)

1. Shc-PTB

GSSHHHHHHS SGLVPRGSHM GQLGGEEWTR HGSFVNKPTR GWLHPNDKVM GPGVSYLVRY MGCVEVLQSM RALDFNTRTQ VTREAISLVC EAVPGAKGAT RRRKPCSRPL SSILGRSNLK FAGMPITLTV STSSLNLMAA DCKQIIANHH MQSISFASGG DPDTAEYVAY VAKDPVNQRA CHILECPEGL AQDVISTIGQ AFELRFKQYL R

2. Integrin beta3

RAKWDTANNP LXKEATSTFT NITXRGT

Sample

Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 273 K, pH 6.5


#NameIsotope labelingTypeConcentration
1Shc-PTB[U-99% 13C; U-99% 15N]0.4 mM
2Integrin_beta3natural abundance0.8 mM
3DTTnatural abundance5 mM
4sodium chloridenatural abundance50 mM
5sodium phosphatenatural abundance50 mM
6DSSnatural abundance1 mM
7H2Onatural abundance93 %
8D2Onatural abundance7 %

Protein Blocks Logo
Calculated from 15 models in PDB: 2L1C, Strand ID: A, B Detail


Heteronucl. T1
154 T1 values in 1 lists
Coherence Sz, Field strength (1H) 599.709 MHz, Pressure 1 atm, Temperature 273 K, pH 6.5 Detail
Heteronucl. T2
154 T2 values in 1 lists
Coherence S(+,-), Field strength (1H) 599.709 MHz, Pressure 1 atm, Temperature 273 K, pH 6.5 Detail
Heteronucl. NOE
154 NOE values in 1 lists
Value type peak integral, Field strength (1H) 599.709 MHz, Pressure 1 atm, Temperature 273 K, pH 6.5 Detail
Heteronucl. T1/T2
154 T1/T2 values in 1 lists
Field strength (1H) 599.709 MHz, Pressure 1 atm, Temperature 273 K, pH 6.5 Detail
Release date
2010-09-01
Citation
Integrin {beta}3 phosphorylation dictates its complex with the Shc phosphotyrosine-binding (PTB) domain
Deshmukh, L., Gorbatyuk, V., Vinogradova, O.
J. Biol. Chem. (2010), 285, 34875-34884, PubMed 20739287 , DOI 10.1074/jbc.M110.159087 ,
Related entities 1. Shc-PTB, : 3 : 35 entities Detail
Related entities 2. Integrin beta3, : 1 : 1 : 12 : 30 entities Detail
Interaction partners 2. Integrin beta3, : 43 interactors Detail
Experiments performed 16 experiments Detail
NMR combined restraints 5 contents Detail
Keywords cytoplasmic tail, integrin beta3, Shc-PTB