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Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6
Authors
Russo, L., Becker, S., Griesinger, C.
Assembly
Nuclear receptor coactivator 1 (E.C.2.3.1.48), Signal transducer and activator of transcription 6
Entity
1. Nuclear receptor coactivator 1 (E.C.2.3.1.48), Signal transducer and activator of transcription 6, entity 1 (polymer, Thiol state: all free), 132 monomers, 14793.62 Da Detail

GHMTGVESFM TKQDTTGKII SIDTSSLRAA GRTGWEDLVR KCIYAFFQPQ GREPSYARQL FQEVMTRGTA SSPSYRFILN DGTMLSAHTR CKLCYPQSPD MQPFIMGIHI IDREHSGLSP QDDTNSGMSI PR


2. Nuclear receptor coactivator 1 (E.C.2.3.1.48), Signal transducer and activator of transcription 6, entity 2 (polymer, Thiol state: not present), 32 monomers, 3451.826 Da Detail

GTWIGEDIFP PLLPPTEQDL TKLLLEGQGE SG


Total weight
18245.445 Da
Max. entity weight
14793.62 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 97.6 %, Completeness: 91.5 %, Completeness (bb): 93.8 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All91.5 % (1720 of 1880)92.4 % (907 of 982)89.2 % (653 of 732)96.4 % (160 of 166)
Backbone93.8 % (900 of 960)94.9 % (315 of 332)92.0 % (438 of 476)96.7 % (147 of 152)
Sidechain90.4 % (966 of 1068)91.1 % (592 of 650)89.4 % (361 of 404)92.9 % (13 of 14)
Aromatic73.9 % (105 of 142)87.3 % (62 of 71)59.4 % (41 of 69)100.0 % (2 of 2)
Methyl97.4 % (148 of 152)98.7 % (75 of 76)96.1 % (73 of 76)

1. entity 1

GHMTGVESFM TKQDTTGKII SIDTSSLRAA GRTGWEDLVR KCIYAFFQPQ GREPSYARQL FQEVMTRGTA SSPSYRFILN DGTMLSAHTR CKLCYPQSPD MQPFIMGIHI IDREHSGLSP QDDTNSGMSI PR

2. entity 2

GTWIGEDIFP PLLPPTEQDL TKLLLEGQGE SG

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 309 K, pH 7.0, Details 50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 1 mM [U-99% 13C; U-99% 15N] STAT6, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1HEPESnatural abundance50 mM
2sodium chloridenatural abundance150 mM
3D2Onatural abundance10 %
4STAT6[U-99% 13C; U-99% 15N]1 mM
Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 309 K, pH 7.0, Details 1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
5HEPESnatural abundance50 mM
6sodium chloridenatural abundance150 mM
7D2Onatural abundance10 %
8STAT6[U-99% 13C; U-99% 15N]1 mM
9NCoA1natural abundance0.7 mM
Sample #3

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 309 K, pH 7.0, Details 0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
10HEPESnatural abundance50 mM
11sodium chloridenatural abundance150 mM
12D2Onatural abundance10 %
13STAT6natural abundance1 mM
14NCoA1[U-99% 13C; U-99% 15N]0.7 mM
Sample #4

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 309 K, pH 7.0, Details 1 mM [U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
15HEPESnatural abundance50 mM
16sodium chloridenatural abundance150 mM
17D2Onatural abundance10 %
18STAT6[U-99% 15N]1 mM
19NCoA1natural abundance0.7 mM
Sample #5

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 309 K, pH 7.0, Details 0.7 mM [U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
20HEPESnatural abundance50 mM
21sodium chloridenatural abundance150 mM
22D2Onatural abundance10 %
23STAT6natural abundance1 mM
24NCoA1[U-99% 15N]0.7 mM
Sample #6

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 309 K, pH 7.0, Details 1 mM [U-99% 15N] STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
25HEPESnatural abundance50 mM
26sodium chloridenatural abundance150 mM
27D2Onatural abundance10 %
28STAT6[U-99% 15N]1 mM
Sample #7

Solvent system 100% D2O, Pressure 1 atm, Temperature 309 K, pH 7.0, Details 1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 100 % D2O, 100% D2O


#NameIsotope labelingTypeConcentration
29HEPESnatural abundance50 mM
30sodium chloridenatural abundance150 mM
31D2Onatural abundance100 %
32STAT6[U-99% 13C; U-99% 15N]1 mM
33NCoA1natural abundance0.7 mM
Sample #8

Solvent system 100% D2O, Pressure 1 atm, Temperature 309 K, pH 7.0, Details 0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 100 % D2O, 100% D2O


#NameIsotope labelingTypeConcentration
34HEPESnatural abundance50 mM
35sodium chloridenatural abundance150 mM
36D2Onatural abundance100 %
37STAT6natural abundance1 mM
38NCoA1[U-99% 13C; U-99% 15N]0.7 mM

Protein Blocks Logo
Calculated from 20 models in PDB: 5NWM, Strand ID: A, B Detail


Release date
2017-11-30
Citation
Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6
Russo, L., Giller, K., Pfitzner, E., Griesinger, C., Becker, S.
Sci. Rep. (2017), 7, 16845-16845, PubMed 29203888 , DOI 10.1038/s41598-017-17088-5 ,
Related entities 1. Nuclear receptor coactivator 1 (E.C.2.3.1.48), Signal transducer and activator of transcription 6, entity 1, : 26 entities Detail
Related entities 2. Nuclear receptor coactivator 1 (E.C.2.3.1.48), Signal transducer and activator of transcription 6, entity 2, : 1 : 3 : 5 entities Detail
Interaction partners 1. Nuclear receptor coactivator 1 (E.C.2.3.1.48), Signal transducer and activator of transcription 6, entity 1, : 25 interactors Detail
Interaction partners 2. Nuclear receptor coactivator 1 (E.C.2.3.1.48), Signal transducer and activator of transcription 6, entity 2, : 35 interactors Detail
Experiments performed 36 experiments Detail
NMR combined restraints 4 contents Detail
Keywords LXXLL motif, NCoA-1, PAS-B domain, STAT6, signaling protein, transactivation domain