Search

NMR solution structure of non-bound [des-Arg10]-kallidin (DAKD)
Authors
Richter, C., Jonker, H.R.A., Schwalbe, H., Joedicke, L., Mao, J., Kuenze, G., Reinhart, C., Kalavacherla, T., Meiler, J., Preu, J., Michel, H., Glaubitz, C.
Assembly
Kininogen-1
Entity
1. Kininogen-1 (polymer, Thiol state: not present), 9 monomers, 1032.194 Da Detail

KRPPGFSPF


Formula weight
1032.194 Da
Exptl. method
solution NMR
Refine. method
torsion angle dynamicssimulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 93.2 %, Completeness (bb): 91.7 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All93.2 % (110 of 118)93.8 % (61 of 65)93.6 % (44 of 47)83.3 % (5 of 6)
Backbone91.7 % (44 of 48)87.5 % (14 of 16)96.2 % (25 of 26)83.3 % (5 of 6)
Sidechain94.9 % (74 of 78)95.9 % (47 of 49)93.1 % (27 of 29)
Aromatic80.0 % (16 of 20)80.0 % (8 of 10)80.0 % (8 of 10)

1. entity 1

KRPPGFSPF

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 295 K, pH 5.6, Details 3 mM DAKD, 50 mM MES, 100 mM sodium chloride, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1DAKDnatural abundance3 mM
2MESnatural abundance50 mM
3sodium chloridenatural abundance100 mM

Protein Blocks Logo
Calculated from 20 models in PDB: 6F27, Strand ID: A Detail


Release date
2017-12-03
Citation
The molecular basis of subtype selectivity of human kinin G-protein-coupled receptors
Joedicke, L., Mao, J., Kuenze, G., Reinhart, C., Kalavacherla, T., Jonker, H., Richter, C., Schwalbe, H., Meiler, J., Preu, J., Michel, H., Glaubitz, C.
Nat. Chem. Biol. (2018), 14, 284-290, PubMed 29334381 , DOI 10.1038/nchembio.2551 ,
Related entities 1. Kininogen-1, : 6 : 6 entities Detail
Interaction partners 1. Kininogen-1, : 10 interactors Detail
Experiments performed 5 experiments Detail
NMR combined restraints 4 contents Detail
Keywords GPCR G-protein-coupled receptor peptide bradykinin kallidin human kinin, MEMBRANE PROTEIN