BMRB: 4220

HIV-1 capsid protein major homology region peptide analog

Authors

Clish, C.B., Peyton, D.H., Barklis, E.

Assembly

HIV-1 capsid

Entity

1. HIV-1 capsid (polymer, Thiol state: not reported), 31 monomers, 3703.145 Da Detail

CSILDIRQGP KEPFRDYVDR FYKTLRAEQA S

Formula weight

3703.145 Da

Source organism

Homo sapiens

Exptl. method

NMR

Refine. method

DISTANCE GEOMETRY

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 96.8 %, Completeness: 77.7 %, Completeness (bb): 93.4 % Detail

Download

• NMR-STAR v3.1 (partial)
• BMRB/XML (partial)
• CSV
• TSV

Polymer type: polypeptide(L)

	Total	1H
All	77.7 % (157 of 202)	77.7 % (157 of 202)
Backbone	93.4 % (57 of 61)	93.4 % (57 of 61)
Sidechain	70.9 % (100 of 141)	70.9 % (100 of 141)
Aromatic	50.0 % (9 of 18)	50.0 % (9 of 18)
Methyl	92.3 % (12 of 13)	92.3 % (12 of 13)

1. HIV-1 capsid

CSILDIRQGP KEPFRDYVDR FYKTLRAEQA S

Show sample condition

Sample

Temperature 298 K, pH 3.1

#	Name	Isotope labeling	Type	Concentration
1	HIV-1 capsid			5.0 ~ 7.0 mM
2	H2O			90 %
3	D2O			10 %

Hide sample codition

Protein Blocks Logo

Calculated from 8 models in PDB: 1BMX, Strand ID: A Detail

---

Release date

2000-04-06

Citation

Solution structures of human immunodeficiency virus type 1 (HIV-1) and moloney murine leukemia virus (MoMLV) capsid protein major-homology-region peptide analogs by NMR spectroscopy
Clish, C.B., Peyton, D.H., Barklis, E.
Eur. J. Biochem. (1998), 257, 69-77, PubMed 9799104 , DOI: , Abstract

Related entities 1. HIV-1 capsid, : 1 : 130 : 70 entities Detail

Interaction partners 1. HIV-1 capsid, : 2 interactors Detail

Experiments performed 3 experiments Detail