Search

Solution structure of the syndecan-4 whole cytoplasmic domain
Authors
Lee, D., Oh, E.S., Woods, A., Couchman, J.R., Lee, W.
Assembly
syndecan-4 whole cytoplasmic domain
Entity
1. syndecan-4 whole cytoplasmic domain (polymer, Thiol state: not present), 28 monomers, 3306.785 × 2 Da Detail

RMKKKDEGSY DLGKKPIYKK APTNEFYA


Total weight
6613.57 Da
Max. entity weight
3306.785 Da
Exptl. method
NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 93.8 %, Completeness (bb): 100.0 % Detail

Polymer type: polypeptide(L)

Total1H
All93.8 % (181 of 193)93.8 % (181 of 193)
Backbone100.0 % (54 of 54)100.0 % (54 of 54)
Sidechain91.4 % (127 of 139)91.4 % (127 of 139)
Aromatic94.1 % (16 of 17)94.1 % (16 of 17)
Methyl100.0 % (7 of 7)100.0 % (7 of 7)

1. Syndecan 4

RMKKKDEGSY DLGKKPIYKK APTNEFYA

Sample

Pressure 1 atm, Temperature 298 K, pH 7.4


#NameIsotope labelingTypeConcentration
1Syndecan 42.0 ~ 4.0 mM
2phosphate buffer50 mM
3H2O90 %
4D2O10 %

Protein Blocks Logo
Calculated from 16 models in PDB: 1EJP, Strand ID: A, B Detail


Release date
2001-03-05
Citation
Solution structure of a syndecan-4 cytoplasmic domain and its interaction with phosphatidylinositol 4,5-bisphosphate
Lee, D., Oh, E.S., Woods, A., Couchman, J.R., Lee, W.
J. Biol. Chem. (1998), 273, 13022-13029, PubMed 9582338 , DOI http://dx.doi.org/10.1074/jbc.273.21.13022 ,
Related entities 1. syndecan-4 whole cytoplasmic domain, : 1 : 7 : 10 entities Detail
Interaction partners 1. syndecan-4 whole cytoplasmic domain, : 8 interactors Detail
Experiments performed 2 experiments Detail
Keywords symmetric-parallel-interwinded dimer