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Solution structure of 2nd intradiskal loop of bovine rhodopsin (residues 172-205)
Authors
Yeagle, P.L., Salloum, A., Chopra, A., Bhawsar, N., Ali, L.
Assembly
SECOND INTRADISKAL LOOP OF RHODOPSIN (RESIDUES 172-205)
Entity
1. SECOND INTRADISKAL LOOP OF RHODOPSIN (RESIDUES 172-205) (polymer, Thiol state: all free), 34 monomers, 3939.320 Da Detail

LVGWSRYIPE GMQCSCGIDY YTPHEETNNE SFVI


Formula weight
3939.32 Da
Source organism
Bos taurus
Exptl. method
NMR
Refine. method
distance geometry
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 88.1 %, Completeness (bb): 93.9 % Detail

Polymer type: polypeptide(L)

Total1H
All88.1 % (178 of 202)88.1 % (178 of 202)
Backbone93.9 % (62 of 66)93.9 % (62 of 66)
Sidechain85.3 % (116 of 136)85.3 % (116 of 136)
Aromatic68.0 % (17 of 25)68.0 % (17 of 25)
Methyl78.6 % (11 of 14)78.6 % (11 of 14)

1. RHODOPSIN

LVGWSRYIPE GMQCSCGIDY YTPHEETNNE SFVI

Sample

Pressure 1 atm, Temperature 303 K


#NameIsotope labelingTypeConcentration
1RHODOPSIN2 mM
2DMSO0.0 ~ 0.0 %

Protein Blocks Logo
Calculated from 1 models in PDB: 1EDV, Strand ID: A Detail


Release date
2001-05-09
Citation
Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin
Yeagle, P.L., Salloum, A., Chopra, A., Bhawsar, N., Ali, L., Kuzmanovski, G., Alderfer, J.L., Albert, A.D.
J. Pept. Res. (2000), 55, 455-465, PubMed 10888202 , DOI 10.1034/j.1399-3011.2000.00707.x ,
Entries sharing articles BMRB: 3, Swiss-Prot: 1 entries Detail
  BMRB: 4655 released on 2001-05-09
    Title Solution Structure of Intradiskal Loop 1 of Bovine Rhodopsin (Rhodopsin Residues 93-123)
  BMRB: 4652 released on 2001-05-08
    Title Solution Structure of Amino Terminus of Bovine Rhodopsin (residues 1-40)
  BMRB: 4653 released on 2001-05-08
    Title Solution structure of third intradiskal loop of bovine rhodopsin (residues 268-293)
  Swiss-Prot: P02699 released on 1986-07-21
    Title OPSD_BOVIN Entity Rhodopsin
Related entities 1. SECOND INTRADISKAL LOOP OF RHODOPSIN (RESIDUES 172-205), : 1 : 42 : 28 : 81 entities Detail
Interaction partners 1. SECOND INTRADISKAL LOOP OF RHODOPSIN (RESIDUES 172-205), : 6 interactors Detail
Experiments performed 2 experiments Detail