BMRBj - BMREntryMaster

Found 1 Document (1.56 seconds)

BMRB: 5597

1N9C

Structure and dynamics of reduced Bacillus pasteurii cytochrome c: oxidation state dependent properties and implications for electron transfer processes

Authors

Bartalesi, I., Bertini, I., Rosato, A.

Assembly

cytochrome c

Entity

1. cytochrome c (polymer, Thiol state: not reported), 71 monomers, 7109.888 Da Detail

VDAEAVVQQK CISCHGGDLT GASAPAIDKA GANYSEEEIL DIILNGQGGM PGGIAKGAEA EAVAAWLAEK K

2. HEM (non-polymer), 616.487 Da

Total weight

7726.375 Da

Max. entity weight

7109.888 Da

Entity Connection

metal coordination 1 Detail

ID	Type	Value order	Atom ID 1	Atom ID 2
1	metal coordination	sing	1:GLU36:OE2	2:HEM1:FE

Source organism

Sporosarcina pasteurii

Exptl. method

NMR

Refine. method

restrained energy minimization

Data set

assigned_chemical_shifts

Chem. Shift Complete1

Sequence coverage: 100.0 %, Completeness: 63.6 %, Completeness (bb): 59.5 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	63.6 % (467 of 734)	93.1 % (349 of 375)	15.8 % (45 of 284)	97.3 % (73 of 75)
Backbone	59.5 % (251 of 422)	98.0 % (147 of 150)	18.2 % (37 of 203)	97.1 % (67 of 69)
Sidechain	60.9 % (227 of 373)	89.8 % (202 of 225)	13.4 % (19 of 142)	100.0 % (6 of 6)
Aromatic	41.7 % (10 of 24)	75.0 % (9 of 12)	0.0 % (0 of 11)	100.0 % (1 of 1)
Methyl	58.1 % (50 of 86)	97.7 % (42 of 43)	18.6 % (8 of 43)

1. cytochrome c

VDAEAVVQQK CISCHGGDLT GASAPAIDKA GANYSEEEIL DIILNGQGGM PGGIAKGAEA EAVAAWLAEK K

Show sample condition

Sample

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
3	cytochrome c	[U-90% 15N]		1 mM
4	phosphate buffer			100 mM

Chem. Shift Complete2

Sequence coverage: 14.1 %, Completeness: 36.6 %, Completeness (bb): 35.0 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	36.6 % (537 of 1468)	51.1 % (383 of 750)	12.9 % (73 of 568)	54.0 % (81 of 150)
Backbone	35.0 % (295 of 844)	54.0 % (162 of 300)	14.3 % (58 of 406)	54.3 % (75 of 138)
Sidechain	34.6 % (258 of 746)	49.1 % (221 of 450)	10.9 % (31 of 284)	50.0 % (6 of 12)
Aromatic	20.8 % (10 of 48)	37.5 % (9 of 24)	0.0 % (0 of 22)	50.0 % (1 of 2)
Methyl	31.4 % (54 of 172)	51.2 % (44 of 86)	11.6 % (10 of 86)

1. cytochrome c

VDAEAVVQQK CISCHGGDLT GASAPAIDKA GANYSEEEIL DIILNGQGGM PGGIAKGAEA EAVAAWLAEK K

Show sample condition

Sample

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
3	cytochrome c	[U-90% 15N]		1 mM
4	phosphate buffer			100 mM

Protein Blocks Logo

Calculated from 30 models in PDB: 1N9C, Strand ID: A Detail

Release date

2003-02-20

Citation

Structure and dynamics of reduced Bacillus pasteurii cytochrome c: oxidation state dependent properties and implications for electron transfer processes
Bartalesi, I., Bertini, I., Rosato, A.
Biochemistry (2003), 42, 739-745, PubMed 12534286 , DOI 10.1021/bi0266028 , Abstract

Related entities 1. cytochrome c, : 1 : 5 : 14 entities Detail

Experiments performed 7 experiments Detail

1 1H-15N NOESY

Instrument

#1 Model Bruker AVANCE (800 MHz)

#2 Model Bruker AVANCE (500 MHz)

Sample #1

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
1	cytochrome c			1 mM
2	phosphate buffer			100 mM

Sample #2

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
3	cytochrome c	[U-90% 15N]		1 mM
4	phosphate buffer			100 mM

2 1H-15N TOCSY

Instrument

#1 Model Bruker AVANCE (800 MHz)

#2 Model Bruker AVANCE (500 MHz)

Sample #1

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
1	cytochrome c			1 mM
2	phosphate buffer			100 mM

Sample #2

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
3	cytochrome c	[U-90% 15N]		1 mM
4	phosphate buffer			100 mM

3 1H-1H NOESY

Instrument

#1 Model Bruker AVANCE (800 MHz)

#2 Model Bruker AVANCE (500 MHz)

Sample #1

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
1	cytochrome c			1 mM
2	phosphate buffer			100 mM

Sample #2

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
3	cytochrome c	[U-90% 15N]		1 mM
4	phosphate buffer			100 mM

4 1H-1H TOCSY

Instrument

#1 Model Bruker AVANCE (800 MHz)

#2 Model Bruker AVANCE (500 MHz)

Sample #1

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
1	cytochrome c			1 mM
2	phosphate buffer			100 mM

Sample #2

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
3	cytochrome c	[U-90% 15N]		1 mM
4	phosphate buffer			100 mM

5 HNHA

Instrument

#1 Model Bruker AVANCE (800 MHz)

#2 Model Bruker AVANCE (500 MHz)

Sample #1

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
1	cytochrome c			1 mM
2	phosphate buffer			100 mM

Sample #2

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
3	cytochrome c	[U-90% 15N]		1 mM
4	phosphate buffer			100 mM

6 HNHB

Instrument

#1 Model Bruker AVANCE (800 MHz)

#2 Model Bruker AVANCE (500 MHz)

Sample #1

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
1	cytochrome c			1 mM
2	phosphate buffer			100 mM

Sample #2

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
3	cytochrome c	[U-90% 15N]		1 mM
4	phosphate buffer			100 mM

7 N15 HSQC

Instrument

#1 Model Bruker AVANCE (800 MHz)

#2 Model Bruker AVANCE (500 MHz)

Sample #1

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
1	cytochrome c			1 mM
2	phosphate buffer			100 mM

Sample #2

Temperature 296 (±1) K, pH 7.0 (±0.1)

#	Name	Isotope labeling	Type	Concentration
3	cytochrome c	[U-90% 15N]		1 mM
4	phosphate buffer			100 mM

nullKeywords cytochrome c, redox, electron transfer

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Found 1 Document (1.56 seconds)

BMRB: 5597

Sample

Sample

Related entities 1. cytochrome c, : 1 : 5 : 14 entities Detail

Experiments performed 7 experiments Detail

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