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Chemical Shift assignment of the blue shifted inetrmediate state of Delta25-PYP
Authors
Bernard, C., Houben, K., Derix, N.M., Marks, D., van der Horst, M., Hellingwerf, K., Boelens, R., Kaptein, R., van Nuland, N.A.J.
Assembly
delta25-PYP
Entity
1. delta25-PYP (polymer, Thiol state: all free), 100 monomers, 11168.55 Da Detail

LAFGAIQLDG DGNILQYNAA EGDITGRDPK QVIGKNFFKD VAPCTDSPEF YGKFKEGVAS GNLNTMFEYT FDYQMTPTKV KVHMKKALSG DSYWVFVKRV


Formula weight
11168.55 Da
Source organism
Halorhodospira halophila
Exptl. method
NMR
Refine. method
torsion angle dynamics, simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 98.0 %, Completeness: 60.8 %, Completeness (bb): 78.7 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All60.8 % (717 of 1179)68.7 % (420 of 611)42.6 % (197 of 462)94.3 % (100 of 106)
Backbone78.7 % (466 of 592)90.8 % (187 of 206)65.2 % (189 of 290)93.8 % (90 of 96)
Sidechain49.5 % (335 of 677)57.5 % (233 of 405)35.1 % (92 of 262)100.0 % (10 of 10)
Aromatic19.9 % (27 of 136)38.2 % (26 of 68) 0.0 % (0 of 67)100.0 % (1 of 1)
Methyl51.1 % (48 of 94)78.7 % (37 of 47)23.4 % (11 of 47)

1. Delta25-PYP light state

LAFGAIQLDG DGNILQYNAA EGDITGRDPK QVIGKNFFKD VAPCTDSPEF YGKFKEGVAS GNLNTMFEYT FDYQMTPTKV KVHMKKALSG DSYWVFVKRV

Sample #1

Temperature 293 (±0) K, pH 7 (±0)


#NameIsotope labelingTypeConcentration
1Delta25-PYP light state[U-13C; U-15N]1 mM
2phosphate buffer50 mM
Sample #2

Temperature 293 (±0) K, pH 7 (±0)


#NameIsotope labelingTypeConcentration
3Delta25-PYP light state[U-15N]1 mM
4phosphate buffer50 mM

Protein Blocks Logo
Calculated from 20 models in PDB: 1XFQ, Strand ID: A Detail


Release date
2005-07-24
Citation
The solution structure of a transient photoreceptor intermediate: Delta25 photoactive yellow protein
Bernard, C., Houben, K., Derix, N.M., Marks, D., van der Horst, M.A., Hellingwerf, K.J., Boelens, R., Kaptein, R., van Nuland, N.A.
Structure (2005), 13, 953-962, PubMed 16004868 , DOI 10.1016/j.str.2005.04.017 ,
Entries sharing articles BMRB: 1 entries Detail
  BMRB: 6321 released on 2005-07-24
    Title Chemical Shift assignment of the Ground-State of Delta25-PYP
Related entities 1. delta25-PYP, : 1 : 45 : 17 : 34 : 12 entities Detail
Experiments performed 9 experiments Detail
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