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BMRB: 6604

1H, 13C, and 15N complete chemical shift assignments for v-Src SH2 domain complexed with PQpYEEIPI ligand.

Authors

Fawaz, R.R., Taylor, J.D., Williams, M.A., Ababou, A., Ladbury, J.E.

Assembly

v-Src-SH2 complexed with PQpYEEIPI

Entity

1. v-Src SH2 (polymer, Thiol state: all free), 106 monomers, 12167.58 Da Detail

QAEEWYFGKI TRRESERLLL NPENPRGTFL VRESETTKGA YCLSVSDFDN AKGLNVKHYK IRKLDSGGFY ITSRTQFSSL QQLVAYYSKH ADGLCHRLTN VCPTSK

2. PQpYEEIPI (polymer, Thiol state: all free), 8 monomers, 1068.069 Da Detail

PQXEEIPI

Total weight

13235.649 Da

Max. entity weight

12167.58 Da

Source organism

Rous sarcoma virus

Exptl. method

NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 93.0 %, Completeness: 91.5 %, Completeness (bb): 92.8 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	91.5 % (1232 of 1346)	91.8 % (647 of 705)	90.6 % (473 of 522)	94.1 % (112 of 119)
Backbone	92.8 % (620 of 668)	94.3 % (215 of 228)	91.3 % (303 of 332)	94.4 % (102 of 108)
Sidechain	90.7 % (711 of 784)	90.6 % (432 of 477)	90.9 % (269 of 296)	90.9 % (10 of 11)
Aromatic	92.6 % (113 of 122)	93.4 % (57 of 61)	91.7 % (55 of 60)	100.0 % (1 of 1)
Methyl	90.0 % (99 of 110)	90.9 % (50 of 55)	89.1 % (49 of 55)

1. v-Src SH2

QAEEWYFGKI TRRESERLLL NPENPRGTFL VRESETTKGA YCLSVSDFDN AKGLNVKHYK IRKLDSGGFY ITSRTQFSSL QQLVAYYSKH ADGLCHRLTN VCPTSK

2. PQpYEEIPI

PQXEEIPI

Show sample condition

Sample

Temperature 298.15 (±2) K, pH 6 (±0.1)

#	Name	Isotope labeling	Type	Concentration
1	v-Src SH2	[U-95% 13C]	protein	0.5 mM
2	v-Src SH2	[U-90% 15N]	protein	0.5 mM
3	PQpYEEIPI			1.5 mM
4	MES			20 mM
5	NaCl			50 mM
6	DTT			1 mM

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	internal	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	internal	indirect	0.1013291

Referencing offset: 0.78 ppm, Outliers: 1 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	internal	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	internal	indirect	0.1013291

Referencing offset: 0.78 ppm, Outliers: 1 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	internal	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	internal	indirect	0.1013291

Referencing offset: -0.02 ppm, Outliers: 1 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	internal	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	internal	indirect	0.1013291

Referencing offset: -0.38 ppm, Outliers: 6 Detail

Release date

2005-10-25

Citation

NMR assignment of the apo and peptide-bound SH2 domain from the Rous sarcoma viral protein Src
Taylor, J.D., Fawaz, R.R., Ababou, A., Williams, M.A., Ladbury, J.E.
J. Biomol. NMR (2005), 32, 339-339, PubMed 16211495 , DOI 10.1007/s10858-005-0471-7

Entries sharing articles BMRB: 1 entries Detail

BMRB: 6503 released on 2005-10-23
Title 1H, 13C, and 15N complete chemical shift assignments for the apo v-Src SH2 domain

Related entities 1. v-Src SH2, : 97 entities Detail

Experiments performed 13 experiments Detail

1 HNCA