BMRBj - BMREntryMaster

Found 1 Document (1.367 seconds)

BMRB: 1584

Deletion of the omega-loop in the Active Site of Staphylococcal Nuclease 2. Effects on Protein Structure and Dynamics

Authors

Baldisseri, D.M., Torchia, D.A., Poole, L.B., Gerlt, J.A.

Assembly

micrococcal nuclease

Source organism

Staphylococcus aureus

Exptl. method

NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 89.3 %, Completeness: 27.6 %, Completeness (bb): 66.1 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹⁵N
All	27.6 % (278 of 1007)	16.9 % (145 of 860)	90.5 % (133 of 147)
Backbone	66.1 % (273 of 413)	50.0 % (140 of 280)	100.0 % (133 of 133)
Sidechain	0.8 % (5 of 594)	0.9 % (5 of 580)	0.0 % (0 of 14)
Aromatic	0.0 % (0 of 56)	0.0 % (0 of 55)	0.0 % (0 of 1)
Methyl	1.4 % (1 of 70)	1.4 % (1 of 70)

1. micrococcal nuclease

XXXXXXXXXX XXKLHKEPAT LIKAIDGDTV KLMYKGQPMT FRLLLVDTPD GVEKYGPEAS AFTKKMVENA KKIEVEFNKG QRTDKYGRGL AYIYADGKMV NEALVRQGLA KVAYVYKNNT HEQHLRKSEA QAKKEKLNIW SENDADSGQ

Show sample condition

Sample

Temperature 310 K, pH 6.4

Release date

1995-07-30

Citation

Deletion of the omega-loop in the active site of staphylococcal nuclease. 2. Effects on protein structure and dynamics
Baldisseri, D.M., Torchia, D.A., Poole, L.B., Gerlt, J.A.
Biochemistry (1991), 30, 3628-3633, PubMed 2015220 , DOI: , Abstract

Related entities 1. micrococcal nuclease, : 128 entities Detail

Experiments performed 1 experiments Detail

Chemical shift validation 3 contents Detail

Properties

Input source #1: Assigned chemical shifts - Assigned chemical shifts	bmr1584_3.str
Diamagnetism of the molecular assembly	True (excluding Oxygen atoms)
Whether the assembly has a disulfide bond	None
Whether the assembly has a other bond	None
Whether the assembly contains a cyclic polymer	None
Overall data processing status	Warning

Disulfide bonds

None

Other bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)

None

Non-standard residues

None

Content subtype: bmr1584_3.str

#	Content subtype	Saveframe	Status	# of rows	Experiment type	Sequence coverage (%)
1	Assigned chemical shifts	chemical_shift_assignment_data_set_one	Warning	266		89.3 (chain: 1, length: 149)

Assigned chemical shifts

Saveframe: chemical_shift_assignment_data_set_one
- Status: Warning
- Sequence coverage of experimental data
  - Entity_assembly_ID: 1, Chain length: 149, Sequence coverage: 89.3%
- Total number of assignments
  - ¹H chemical shifts: 133
  - ¹⁵N chemical shifts: 133
- Completeness of assignments
  - Entity_assemble_ID: 1
- Histogram of normalized assigned chemical shifts
- Random coil index and derived parameters (S² and NMR RMSD)
  - Chain_ID: 1

Comp_index_ID	Comp_ID
1	X
2	X
3	X
4	X
5	X
6	X
7	X
8	X
9	X
10	X
11	X
12	X

Search

Query history

Resources

Search for primary databases

Search for subsidiary databases

Display

Hits per page

Statistics

Query Changes will take effect after "OK" button is selected.

Maximum hits

Default conjunction operator

Omni-box

Search filter

Sequence search (BLAST)

E-value

Query sequence coverage

Miscellaneous

The number of previewed publications

Completeness of assigned chemical shift

Sequence chart about top aligned regions

Sequence chart about interacting regions

Hit context with highlight

Link destinations for BMRB, PDB and EMDB

Found 1 Document (1.367 seconds)

BMRB: 1584

Sample

Related entities 1. micrococcal nuclease, : 128 entities Detail

Experiments performed 1 experiments Detail

Instrument

Sample

Chemical shift validation 3 contents Detail

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	860	133	15.5
¹⁵N chemical shifts	152	133	87.5

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	280	133	47.5
¹⁵N chemical shifts	133	133	100.0