Search

An Examination of Coaxial Stacking of Helical Stems in a Pseudoknot Motif: the Gene 32 Messenger RNA Pseudoknot of Bacteriophage T2
Authors
Holland, J.A., Hansen, M.R., Du, Z., Hoffman, D.W.
Assembly
T2 RNA Pseudoknot
Entity
1. T2 RNA Pseudoknot (polymer), 36 monomers, 11572.86 Da Detail

GCUGACCAGC UAUGAGGUCA UACAUCGUCA UAGCAC


Formula weight
11572.86 Da
Source organism
Enterobacteria phage T2
Exptl. method
NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 68.9 %, Completeness (bb): 58.6 % Detail

Polymer type: polyribonucleotide

Total1H13C15N
All68.9 % (397 of 576)69.9 % (221 of 316)66.4 % (162 of 244)87.5 % (14 of 16)
Suger, PO458.6 % (232 of 396)62.0 % (134 of 216)54.4 % (98 of 180)
Nucleobase91.7 % (165 of 180)87.0 % (87 of 100)100.0 % (64 of 64)87.5 % (14 of 16)
Aromatic95.6 % (153 of 160)93.8 % (75 of 80)100.0 % (64 of 64)87.5 % (14 of 16)

1. Gene 32 mRNA Pseudoknot of Bacteriophage T2

GCUGACCAGC UAUGAGGUCA UACAUCGUCA UAGCAC

Sample

Temperature 298 (±1) K, pH 6.4 (±0.4)


#NameIsotope labelingTypeConcentration
1Gene 32 mRNA Pseudoknot of Bacteriophage T2[U-100% 15N]10 mg/uL

Release date
1999-11-28
Citation 1
An Examination of Coaxial Stacking of Helical Stems in a Pseudoknot Motif: the Gene 32 Messenger RNA Pseudoknot of Bacteriophage T2
Holland, J.A., Hansen, M.R., Du, Z., Hoffman, D.W.
RNA (1999), 5, 257-271, DOI 10.1017/s1355838299981360
Citation 2
1H, 13C and 15N chemical shift referencing in biomolecular NMR
Wishart, D.S., Bigam, C.G., Yao, J., Abildgaard, F., Dyson, H.J., Oldfield, E., Markley, J.L., Sykes, B.D.
J. Biomol. NMR (1995), 6, 135-140, PubMed 8589602 , DOI 10.1007/bf00211777 ,
Related entities 1. T2 RNA Pseudoknot, : 1 entities Detail
Experiments performed 8 experiments Detail
Chemical shift validation 3 contents Detail
Keywords Coxial_Stacking, NMR, Pseudoknot, RNA