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Solution Structure of Alpha-conotoxin SI
Authors
Benie, A.J., Whitford, D., Hargittai, B., Barany, G., Janes, R.W.
Assembly
alpha-conotoxin SI
Entity
1. alpha-conotoxin SI (polymer, Thiol state: all disulfide bound), 14 monomers, 1356.636 Da Detail

ICCNPACGPK YSCX


Formula weight
1356.636 Da
Entity Connection
disulfide 2 Detail

IDTypeValue orderAtom ID 1Atom ID 2
1disulfidesing1:CYS3:SG1:CYS13:SG
2disulfidesing1:CYS2:SG1:CYS7:SG

Source organism
Conus striatus
Exptl. method
NMR
Refine. method
TORSION ANGLE DYNAMICS
Data set
assigned_chemical_shifts, coupling_constants
Chem. Shift Complete
Sequence coverage: 92.9 %, Completeness: 87.8 %, Completeness (bb): 79.4 % Detail

Polymer type: polypeptide(L)

Total1H13C
All87.8 % (108 of 123)98.6 % (70 of 71)73.1 % (38 of 52)
Backbone79.4 % (50 of 63)96.0 % (24 of 25)68.4 % (26 of 38)
Sidechain97.2 % (70 of 72)100.0 % (46 of 46)92.3 % (24 of 26)
Aromatic75.0 % (6 of 8)100.0 % (4 of 4)50.0 % (2 of 4)
Methyl100.0 % (6 of 6)100.0 % (3 of 3)100.0 % (3 of 3)

1. conotoxin

ICCNPACGPK YSCX

Sample

Temperature 283 (±0.1) K, pH 4.2 (±0.01), Details Adjusted to pH4.2 with HCl


#NameIsotope labelingTypeConcentration
1conotoxin4.9 ~ 5.1 mM

Protein Blocks Logo
Calculated from 36 models in PDB: 1QMW, Strand ID: A Detail


Coupling constant
18 J values in 2 lists
Temperature 283 (±0.1) K, pH 4.2 (±0.01) Detail
Release date
2008-07-16
Citation 1
Solution structure of alpha-conotoxin SI
Benie, A.J., Whitford, D., Hargittai, B., Barany, G., Janes, R.W.
FEBS Lett. (2000), 476, 287-295, PubMed 10913630 , DOI 10.2210/pdb1qmw/pdb ,
Citation 2
NMRPipe: a multidimensional spectral processing system based on UNIX pipes
Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J., Bax, A.
J. Biomol. NMR (1995), 6, 277-293, PubMed 8520220 , DOI 10.1007/bf00197809 ,
Citation 3
The program XEASY for computer-supported NMR spectral analysis of biological macromolecules
Bartels, C., Xia, T., Billeter, M., Guntert, P., Wuthrich, K.
J. Biomol. NMR (1995), 6, 1-10, PubMed 22911575 , DOI 10.1007/BF00417486 ,
Citation 4
1H, 13C and 15N chemical shift referencing in biomolecular NMR
Wishart, D.S., Bigam, C.G., Yao, J., Abildgaard, F., Dyson, H.J., Oldfield, E., Markley, J.L., Sykes, B.D.
J. Biomol. NMR (1995), 6, 135-140, PubMed 8589602 , DOI 10.1007/bf00211777 ,
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  BMRB: 4419 released on 1999-11-11
    Title NMR structure with tightly bound water molecules of cytotoxin II (cardiotoxin) from Naja naja oxiana in aqueous solution (major form)
  BMRB: 4254 released on 1999-10-25
    Title 1H, 15N and 13C Assignments of the DNA Binding Domain of Transcription Factor Mbp1 from Sassharomyces cerevisiae in Both Its Free and DNA Bound Forms and 1H Assignments of the Free DNA
  BMRB: 4040 released on 1999-10-09
    Title Main-Chain NMR Assignments for AsiA
  BMRB: 4352 released on 1999-10-06
    Title Backbone 1H, 13C, and 15N Chemical Shift Assignments for the Inhibitor-Bound DNase Domain of Colicin E9.
  BMRB: 4154 released on 1999-09-27
    Title 13C and Stereospecific 13C and 1H Resonance Assignments for Oxidized Putidaredoxin
  BMRB: 4245 released on 1999-09-14
    Title Assessing Potential Bias in the Determination of Rotational Correlation Times of Proteins by NMR Relaxation
  BMRB: 4156 released on 1999-08-05
    Title The Structure in Solution of the b Domain of Protein Disulfide Isomerase
  BMRB: 4249 released on 1999-08-05
    Title Solution Structure of the DNA- and RPA-binding Domain of the Human Repair Factor XPA
  BMRB: 4324 released on 1999-07-11
    Title Characterization of Monomeric and Dimeric B-domain of Staphyococcal Protein A: Sources of Stabilization of a 3-helix Bundle Protein.
  BMRB: 4134 released on 1999-06-16
    Title NMR Assignments for Denatured LysN
  BMRB: 4232 released on 1999-05-24
    Title N-Domain of Troponin C from Chicken Skeletal Muscle.
  BMRB: 4336 released on 1999-05-10
    Title Backbone and Sequence-Specific Assignment of Three Forms of the Lipoate Containing H-protein of the Glycine Decarboxylase Complex.
  BMRB: 4337 released on 1999-05-09
    Title Backbone and Sequence-Specific Assignment of Three Forms of the Lipoate-Containing H-protein of the Glycine Decarboxylase Complex.
  BMRB: 4338 released on 1999-05-09
    Title Backbone and Sequence-Specific Assignment of Three Forms of the Lipoate-Containing H-protein of the Glycine Decarboxylase Complex.
  BMRB: 4298 released on 1999-03-09
    Title A Synthetic Cyclic Peptide Corresponding to the Complete V3 Loop of the RF HIV-1 Strain in Water Solution
  BMRB: 4293 released on 1999-03-08
    Title Assignment of 1H, 13C and 15N Signals of the DNase Domain of Colicin E9
  BMRB: 4312 released on 1999-03-02
    Title 1H, 15N and 13C Resonance Assignments for the Bromodomain of the Histone Acetyltransferase hsP/CAF
  BMRB: 4155 released on 1999-02-28
    Title Solution Structure of Eotaxin: A Chemokine that Selectively Recruits Eosinophils in Allergic Inflammation
  BMRB: 4183 released on 1999-02-28
    Title Expression and Assignment of 1H, 15N,and 13C Resonances of the C-terminal Domain of the Diphtheria Toxin Repressor
  BMRB: 4297 released on 1999-02-21
    Title Chemical Shifts (1H, 13C, 15N) and J-couplings (3JHNHA, 3JNHB, 3JHAHB) for the N-terminal Domain of E. coli DnaB Helicase, DnaB(24-136)
  BMRB: 4109 released on 1999-02-01
    Title Sequence Specific 1H, 13C and 15N Resonance Assignment of Rat CD2 Domain 1
  BMRB: 4124 released on 1999-02-01
    Title Main-chain Signal Assignment for the PDZ2 Domain from Human Protein Tyrosine Phosphatase hPTP1E and its Complex with a C-terminal Peptide from the Fas Receptor
  BMRB: 4097 released on 1999-01-24
    Title Backbone 1H, 13C and 15N Chemical Shift Assignment for the HIV-1 RNase H Domain
  BMRB: 4242 released on 1999-01-24
    Title Motile Major Sperm Protein (MSP) of Ascaris suum
  BMRB: 4098 released on 1998-12-20
    Title 1H, 15N and 13C Resonance Assignments and Secondary Structure of Apo Liver Fatty Acid-Binding Protein
  BMRB: 4259 released on 1998-10-29
    Title Sequential Assignment and Solution Secondary Structure of Doubly Labelled Ribonuclease Sa
  BMRB: 4110 released on 1998-10-13
    Title 1H, 13C, 15N Resonance Assignment of the 20 KDa Double Stranded RNA Binding Domain of PKR
  BMRB: 4075 released on 1998-10-11
    Title Backbone NMR Assignments and Secondary Structure of the N Terminal Domain of DnaB Helicase from E. coli
  BMRB: 4203 released on 1998-09-16
    Title An NMR Conformational Analysis of Synthetic Peptide Cn2(1-15)NH2-S-S-AcetylCn2(52-66)NH2 from the New World Centruroides Noxius 2(Cn2) Scorpion Toxin. Comparison of the Structure with those of the Centruroides Scorpion Toxins.
  BMRB: 4157 released on 1998-07-01
    Title Three-dimensional Solution Structure of Lactoferricin B, an Antimicrobial Peptide Derived from Bovine Lactoferrin
  BMRB: 4081 released on 1998-03-19
    Title Sequence-specific 1H, 13C and 15N NMR Assignments of Recombinant Human Interferon Alpha-2a
  BMRB: 4107 released on 1998-03-03
    Title Acid Denatured Cold Shock Protein A (CspA)
  BMRB: 4108 released on 1998-03-03
    Title Acid/Urea denatured cold shock protein A (CspA)
  BMRB: 4072 released on 1998-02-24
    Title Sequence Specific 1HA, 15N, 13CA, and 13CB Assignments for RNA-1 Modulator Protein ROM
  Swiss-Prot: P15471 released on 1990-04-01
    Title CAS1_CONST Entity Alpha-conotoxin S1
Related entities 1. alpha-conotoxin SI, : 1 : 2 : 18 entities Detail
Experiments performed 6 experiments Detail
nullKeywords conotoxin, nicotinic acetylcholine receptor, toxin, venom