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Assignment of 1H, 13C, 15N and 31P resonances of the FYVE domain in the complex with phosphatidylinositol 3-phosphate.
Authors
Kutateladze, T.G., Overduin, M.
Assembly
complex of the FYVE domain of EEA1 with PtdIns3P
Entity
1. Early Endosome Antigen 1 (polymer, Thiol state: all other bound), 86 monomers, 9579.795 Da Detail

AVQELGRENQ SLQIKHTQAL NRKWAEDNEV QNCMACGKGF SVTVRRHHCR QCGNIFCAEC SAKNALTPSS KKPVRVCDAC FNDLQG


2. 1,2 Dibutanoyl-sn-glycero-3-phospho[1D-myo-inositol] (non-polymer), 1 monomers, na Da
3. ZINC ION (non-polymer), 65.409 × 2 Da
Total weight
9710.613 Da
Max. entity weight
9579.795 Da
Entity Connection
na 8 Detail

IDTypeValue orderAtom ID 1Atom ID 2
1nasing1:CYS33:SG3:ZN1:ZN
2nasing1:CYS36:SG3:ZN1:ZN
3nasing1:CYS49:SG3:ZN1:ZN
4nasing1:CYS60:SG3:ZN1:ZN
5nasing1:CYS52:SG3:ZN1:ZN
6nasing1:CYS57:SG3:ZN1:ZN
7nasing1:CYS77:SG3:ZN1:ZN
8nasing1:CYS80:SG3:ZN1:ZN

Source organism
Homo sapiens
Exptl. method
NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete1
Sequence coverage: 100.0 %, Completeness: 98.6 %, Completeness (bb): 98.8 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All98.6 % (960 of 974)98.8 % (506 of 512)97.8 % (355 of 363)100.0 % (99 of 99)
Backbone98.8 % (506 of 512)98.9 % (173 of 175)98.4 % (249 of 253)100.0 % (84 of 84)
Sidechain98.3 % (534 of 543)98.8 % (333 of 337)97.4 % (186 of 191)100.0 % (15 of 15)
Aromatic100.0 % (54 of 54)100.0 % (27 of 27)100.0 % (26 of 26)100.0 % (1 of 1)
Methyl97.3 % (72 of 74)97.3 % (36 of 37)97.3 % (36 of 37)

1. Early Endosome Antigen 1

AVQELGRENQ SLQIKHTQAL NRKWAEDNEV QNCMACGKGF SVTVRRHHCR QCGNIFCAEC SAKNALTPSS KKPVRVCDAC FNDLQG

Sample

Temperature 298 (±1) K, pH 6.7 (±0.1)


#NameIsotope labelingTypeConcentration
1Early Endosome Antigen 1[U-15N]2.0 mM
21,2 Dibutanoyl-sn-glycero-3-phospho[1D-myo-inositol]1.0 mM
3ZINC (II) ION2.0 mM

Chem. Shift Complete2
Sequence coverage: 18.6 %, Completeness: 54.7 %, Completeness (bb): 55.6 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All54.7 % (1065 of 1948)55.2 % (565 of 1024)52.8 % (383 of 726)59.1 % (117 of 198)
Backbone55.6 % (569 of 1024)56.0 % (196 of 350)54.2 % (274 of 506)58.9 % (99 of 168)
Sidechain53.4 % (580 of 1086)54.7 % (369 of 674)50.5 % (193 of 382)60.0 % (18 of 30)
Aromatic56.5 % (61 of 108)61.1 % (33 of 54)50.0 % (26 of 52)100.0 % (2 of 2)
Methyl50.0 % (74 of 148)51.4 % (38 of 74)48.6 % (36 of 74)

1. Early Endosome Antigen 1

AVQELGRENQ SLQIKHTQAL NRKWAEDNEV QNCMACGKGF SVTVRRHHCR QCGNIFCAEC SAKNALTPSS KKPVRVCDAC FNDLQG

Sample

Temperature 298 (±1) K, pH 6.7 (±0.1)


#NameIsotope labelingTypeConcentration
1Early Endosome Antigen 1[U-15N]2.0 mM
21,2 Dibutanoyl-sn-glycero-3-phospho[1D-myo-inositol]1.0 mM
3ZINC (II) ION2.0 mM

LACS Plot; CA
Referencing offset: -0.05 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.05 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.02 ppm, Outliers: 2 Detail
LACS Plot; CO
Referencing offset: 0.19 ppm, Outliers: 2 Detail
Release date
2005-06-01
Citation 1
Multivalent mechanism of membrane insertion by the FYVE domain
Kutateladze, T.G., Capelluto, D.G., Ferguson, C.G., Cheever, M.L., Kutateladze, A.G., Prestwich, G.D., Overduin, M.
J. Biol. Chem. (2004), 279, 3050-3057, PubMed 14578346 , DOI 10.1074/jbc.M309007200 ,
Citation 2
NMRPipe: a multidimensional spectral processing system based on UNIX pipes
Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J., Bax, A.
J. Biomol. NMR (1995), 6, 277-293, PubMed 8520220 ,
Citation 3
A Common Sense Approach to Peak Picking in Two-, Three-, and Four-Dimensional Spectra Uning Automatic Computer Analysis of Contour Diagrams
Garrett, D.S., Powers, R., Gronenborn, A.M., Clore, G.M.
J. Magn. Reson. (1991), 95, 214-220
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Related entities 1. Early Endosome Antigen 1, : 1 : 2 : 36 entities Detail
Interaction partners 1. Early Endosome Antigen 1, : 48 interactors Detail
Experiments performed 12 experiments Detail
Chemical shift validation 6 contents Detail
Keywords Data processing, software, Peak picking