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Sequence-specific resonance assignments of the tandem SH3 domains in autoinhibitory form of p47phox
Authors
Yuzawa, S., Yokochi, M., Fujioka, Y., Ogura, K., Sumimoto, H., Inagaki, F.
Assembly
tandem SH3 domain in autoinhibited form of p47phox
Entity
1. tandem SH3 domain in autoinhibited form of p47phox (polymer, Thiol state: all free), 193 monomers, 21989.44 Da Detail

GAMDITGPII LQTYRAIADY EKTSGSEMAL STGDVVEVVE KSESGWWFCQ MKAKRGWIPA SFLEPLDSPD ETEDPEPNYA GEPYVAIKAY TAVEGDEVSL LEGEAVEVIH KLLDGWWVIR KDDVTGYFPS MYLQKSGQDV SQAQRQIKRG APPRRSSIRN AHSIHQRSRK RLSQDAYRRN SVRFLQQRRR QAR


Formula weight
21989.44 Da
Source organism
Homo sapiens
Exptl. method
NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 98.4 %, Completeness: 48.9 %, Completeness (bb): 83.0 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All48.9 % (1104 of 2258)28.7 % (340 of 1186)67.1 % (583 of 869)89.2 % (181 of 203)
Backbone83.0 % (945 of 1138)56.0 % (218 of 389)97.0 % (549 of 566)97.3 % (178 of 183)
Sidechain25.3 % (329 of 1300)14.8 % (118 of 797)43.3 % (209 of 483)10.0 % (2 of 20)
Aromatic 2.3 % (4 of 176) 4.5 % (4 of 88) 0.0 % (0 of 83) 0.0 % (0 of 5)
Methyl20.4 % (38 of 186)17.2 % (16 of 93)23.7 % (22 of 93)

1. p47phox

GAMDITGPII LQTYRAIADY EKTSGSEMAL STGDVVEVVE KSESGWWFCQ MKAKRGWIPA SFLEPLDSPD ETEDPEPNYA GEPYVAIKAY TAVEGDEVSL LEGEAVEVIH KLLDGWWVIR KDDVTGYFPS MYLQKSGQDV SQAQRQIKRG APPRRSSIRN AHSIHQRSRK RLSQDAYRRN SVRFLQQRRR QAR

Sample

Temperature 298 (±0.1) K, pH 6.5 (±0.05)


#NameIsotope labelingTypeConcentration
1p47phox[U-90% 2H; U-98% 13C; U-98% 15N]1.0 mM

LACS Plot; CA
Referencing offset: 0.6 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: 0.6 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: 0.13 ppm, Outliers: 13 Detail
Release date
2004-06-27
Citation 1
Solution structure of the tandem Src homology 3 domains of p47phox in an autoinhibited form
Yuzawa, S., Ogura, K., Horiuchi, M., Suzuki, N.N., Fujioka, Y., Kataoka, M., Sumimoto, H., Inagaki, F.
J. Biol. Chem. (2004), 279, 29752-29760, PubMed 15123602 , DOI 10.1074/jbc.M401457200 ,
Citation 2
NMRPipe: a multidimensional spectral processing system based on UNIX pipes
Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J., Bax, A.
J. Biomol. NMR (1995), 6, 277-293, PubMed 8520220 ,
Related entities 1. tandem SH3 domain in autoinhibited form of p47phox, : 1 : 3 : 23 entities Detail
Interaction partners 1. tandem SH3 domain in autoinhibited form of p47phox, : 14 interactors Detail
Experiments performed 7 experiments Detail
Chemical shift validation 3 contents Detail
Keywords p47phox, SH3 domain, autoinhibition, multidomain, NADPH oxidase