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Chemical Shift Assignments for Carnobacteriocin B2 immunity protein
Authors
Sprules, T., Kawulka, K.E., Vederas, J.C.
Assembly
Carnobacteriocin B2 immunity protein
Entity
1. Carnobacteriocin B2 immunity protein (polymer, Thiol state: all free), 111 monomers, 12665.51 Da Detail

MDIKSQTLYL NLSEAYKDPE VKANEFLSKL VVQCAGKLTA SNSENSYIEV ISLLSRGISS YYLSHKRIIP SSMLTIYTQI QKDIKNGNID TEKLRKYEIA KGLMSVPYIY F


Formula weight
12665.51 Da
Source organism
Carnobacterium maltaromaticum
Exptl. method
NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts, coupling_constants
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 88.8 %, Completeness (bb): 93.3 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All88.8 % (1195 of 1345)87.6 % (614 of 701)89.5 % (471 of 526)93.2 % (110 of 118)
Backbone93.3 % (616 of 660)94.2 % (210 of 223)93.0 % (306 of 329)92.6 % (100 of 108)
Sidechain85.7 % (679 of 792)84.5 % (404 of 478)87.2 % (265 of 304)100.0 % (10 of 10)
Aromatic53.1 % (51 of 96)56.3 % (27 of 48)50.0 % (24 of 48)
Methyl94.9 % (129 of 136)95.6 % (65 of 68)94.1 % (64 of 68)

1. Carnobacteriocin B2 immunity protein

MDIKSQTLYL NLSEAYKDPE VKANEFLSKL VVQCAGKLTA SNSENSYIEV ISLLSRGISS YYLSHKRIIP SSMLTIYTQI QKDIKNGNID TEKLRKYEIA KGLMSVPYIY F

Sample #1

Temperature 288 (±0.1) K, pH 6.6 (±0.1)


#NameIsotope labelingTypeConcentration
1Carnobacteriocin B2 immunity protein[U-15N]0.8 mM
2DSS0.025 mM
3sodium phosphate20 mM
4sodium chloride25 mM
Sample #2

Temperature 288 (±0.1) K, pH 6.6 (±0.1)


#NameIsotope labelingTypeConcentration
5Carnobacteriocin B2 immunity protein[U-13C; U-15N]0.8 mM
6DSS0.025 mM
7sodium phosphate20 mM
8sodium chloride25 mM

LACS Plot; CA
Referencing offset: 0.05 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: 0.05 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: 0.02 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: -0.1 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 15 models in PDB: 1TDP, Strand ID: A Detail


Coupling constant
71 J values in 1 lists
Temperature 288 (±0.1) K, pH 6.6 (±0.1) Detail
Release date
2004-11-11
Citation 1
NMR solution structure of ImB2, a protein conferring immunity to antimicrobial activity of the type IIa bacteriocin, carnobacteriocin B2
Sprules, T., Kawulka, K.E., Vederas, J.C.
Biochemistry (2004), 43, 11740-11749, PubMed 15362858 , DOI 10.1021/bi048854+ ,
Citation 2
NMRPipe: a multidimensional spectral processing system based on UNIX pipes
Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J., Bax, A.
J. Biomol. NMR (1995), 6, 277-293, PubMed 8520220 ,
Related entities 1. Carnobacteriocin B2 immunity protein, : 1 : 1 : 1 entities Detail
Experiments performed 11 experiments Detail
nullKeywords immunity protein, bacteriocin